refactor (v2): better arch

Co-authored-by: Copilot <copilot@github.com>

crates/application/src/notes/mod.rs

@@ -0,0 +1,16 @@
+pub mod add_tag;
+pub mod archive_note;
+pub mod commands;
+pub mod create_note;
+pub mod delete_note;
+pub mod export_notes;
+pub mod get_note;
+pub mod get_related;
+pub mod get_versions;
+pub mod import_notes;
+pub mod list_notes;
+pub mod pin_note;
+pub mod queries;
+pub mod remove_tag;
+pub mod search_notes;
+pub mod update_note;